Machine Learning/HMM: Difference between revisions
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=== Implementations === | === Implementations === | ||
*[http://ghmm.sourceforge.net/ GHMM] (C) | *[http://ghmm.sourceforge.net/ GHMM] (C) | ||
*[http://hmmer.janelia.org HMMER] (compiled C-apps for Protein (possibly speech) analysis) | *[http://hmmer.janelia.org HMMER] (compiled C-apps for Protein (possibly speech) analysis) | ||
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*[http://www.cs.ubc.ca/~murphyk/Software/HMM/hmm.html HMM Toolbox] (MATLAB) | *[http://www.cs.ubc.ca/~murphyk/Software/HMM/hmm.html HMM Toolbox] (MATLAB) | ||
*[http://code.google.com/p/jahmm/ jahmm] (Java) | *[http://code.google.com/p/jahmm/ jahmm] (Java) | ||
==== R ==== | |||
* [http://cran.r-project.org/web/packages/HMM/index.html HMM]: very simple hidden markov models | |||
* [http://cran.r-project.org/web/packages/hmm.discnp/index.html hmm.discnp]: good, allows multiple observations | |||
* [http://cran.r-project.org/web/packages/msm/index.html msm]: continuous time, with covariates | |||
Revision as of 20:59, 4 August 2010
Hidden Markov Models
Papers/Tutorials
Implementations
- GHMM (C)
- HMMER (compiled C-apps for Protein (possibly speech) analysis)
- logilab-hmm (Python)
- HMM Toolbox (MATLAB)
- jahmm (Java)
R
- HMM: very simple hidden markov models
- hmm.discnp: good, allows multiple observations
- msm: continuous time, with covariates